Trace plot of multiple MCMC sweep sweeps

Source: R/visualize_mcmc_trace.R

A simple line plot showing both the entropy delta and the number of nodes moved for each sweep. sbmr::mcmc_sweep() must be run on object before this function.

visualize_mcmc_trace(sbm)

Arguments

sbm

Object of class sbm_network.

Value

GGplot line plot with x-axis as sweep number and y-axes as sweep entropy delta and number of nodes moved during sweep.

See also

Other visualizations: visualize_collapse_results(), visualize_network(), visualize_propensity_dist(), visualize_propensity_network()

Examples


# Simulate a model and run mcmc sweeps on it
net <- sim_basic_block_network(n_blocks = 3, n_nodes_per_block = 25) %>%
  initialize_blocks(3) %>%
  mcmc_sweep(num_sweeps = 75, track_pairs = TRUE)

# Plot results
visualize_mcmc_trace(net)